Here you are: IMGT Web resources > IMGT Repertoire > Proteins and alleles

Alignment of alleles: house mouse (Mus musculus) TRAV7-1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.

Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.


                                                                                                                            
                                            
                                             1   2   3   4   5   6   7   8   8A  9   10  11  12  13  14  15  16  17  18  19 
                                             Q   Q   K   V   Q   Q   S   P       E   S   L   I   V   P   E   G   G   M   A  
  AF259071   TRAV7-1*01 F V-REGION gDNA     cag cag aag gtg cag cag agc cca ... gaa tcc ctc att gtt cca gag gga ggc atg gcc 

                                                                                                                            
  AE007512   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                            
  AE008683   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                            
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- 



                                                                        ___________________CDR1-IMGT____________________    
                                            
                                             20  21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39 
                                             S   L   N   C   T   F   S   D   R   N                           S   Q   Y   F  
  AF259071   TRAV7-1*01 F V-REGION gDNA     tct ctc aac tgc act ttc agt gat cgt aat ... ... ... ... ... ... tct cag tat ttc 

                                                                                                                            
  AE007512   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- 

                                                                                                                            
  AE008683   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- 

                                                                                                                            
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- --- --- --- 



                                                                                                            _______________C
                                            
                                             40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                             W   W   Y   R   Q   H   S   G   E   G   P   K   A   L   M   S   I   F   S      
  AF259071   TRAV7-1*01 F V-REGION gDNA     tgg tgg tac aga cag cat tct ggg gaa ggc ccc aag gca ctg atg tcc atc ttc tcc ... 

                                                                                                                            
  AE007512   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... 

                                                                                                                            
  AE008683   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... 

                                                                                                                            
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... 



                                            DR2-IMGT________________                                                        
                                            
                                             60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                         N   G   D   K   K   E                       G   R   F   T   A   H  
  AF259071   TRAV7-1*01 F V-REGION gDNA     ... ... ... aat ggt gac aag aag gaa ... ... ... ... ... ggc aga ttc aca gct cac 

                                                                                                                            
  AE007512   TRAV7-1*01 F V-REGION gDNA     ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                            
  AE008683   TRAV7-1*01 F V-REGION gDNA     ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 

                                                                                                                            
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     ... ... ... --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- --- --- 



                                                                                                                            
                                            
                                             80  81  82  83  84 84A  85  86  87  88  89  90  91  92  93  94  95  96  97  98 
                                             L   N   K   A   S       L   Y   V   S   L   H   I   K   D   S   Q   P   S   D  
  AF259071   TRAV7-1*01 F V-REGION gDNA     ctc aat aag gcc agc ... ctg tat gta tcc ctg cac atc aaa gac tcc caa ccc agt gac 

                                                                                                                            
  AE007512   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                                                                            
  AE008683   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

                                                                         H                                                  
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     --- --- --- --- --- ... --- c-- --- --- --- --- --- --- --- --- --- --- --- --- 



                                                                    ___CDR3-IMGT____
                                            
                                             99 100 101 102 103 104 105 106 107 
                                             S   A   L   Y   F   C   A   V   S  
  AF259071   TRAV7-1*01 F V-REGION gDNA     tct gct ctc tac ttc tgt gca gtg agc a

                                                                                
  AE007512   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- -

                                                                                
  AE008683   TRAV7-1*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- -

                                                                                
  IMGT000082 TRAV7-1*02 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- -


This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).

Created:
05/09/2022
Last updated:
22/09/2023
Authors:
Guilhem Zeitoun